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  • Přednáška pro odbornou veřejnost v rámci habilitačního řízení Ing. Vlada Popovici, M.Sc., Ph.D.

    Jménem předsedy habilitační komise prof. Sochora si dovolujeme pozvat všechny
    zájemce na přednášku pro odbornou veřejnost v rámci habilitačního řízení Ing.
    Vlada Popovici, M.Sc., Ph.D. Přednáška pod názvem "Case studies in multimodal
    biomarker discovery" bude proslovena v úterý 27. 3. 2018 od 14 hod v posluchárně
    D2 v rámci informatického kolokvia.
    Abstrakt přednášky:
    High throughput genomic revolution started almost twenty years ago with the
    first in-house printed DNA chips. Since then, various technologies evolved,
    allowing the interrogation of the whole (human) genome, proteome, metabolome,
    etc., all producing large amounts of data. Bioinformatics tools and methods
    evolved to account for all these data modalities with the current bottleneck
    being the integration of these perspectives into a more comprehensive picture.
    In parallel and completely independent of bioinformatics, digital pathology also
    witnessed significant advances fuelled mostly by technological developments:
    slide scanners and computational infrastructure. However, both “classical”
    bioinformatics and digital pathology/bioimaging are often used to investigate
    the same biological phenomenon. It is, therefore, natural to attempt to combine
    these two seemingly incompatible fields with the hope of unveiling new
    connections between them. In this talk we will look at three examples of jointly
    mining the transcriptome and the histopathology images in the context of breast
    and colon cancers. We will also discuss the computational challenges one faces
    when working with these data.

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