Petr Matula

This page contains only partial list of my publications. Complete list can be found in the Information system of the Masaryk University.

Journal articles

• Petr Matula, Pavel Matula, Michal Kozubek, Vladimír Dvořák. Fast Point-Based 3D Alignment of Live Cells. IEEE Transactions on Image Processing, 15(8), 2388-2396, 2006.
• Vladan Ondrej, Stanislav Kozubek, Emilie Lukasova, Martin Falk, Pavel Matula, Petr Matula, Michal Kozubek. Directional motion of foreign plasmid DNA to nuclear HP1 foci. Chromosome Research 14(5), 505-514, 2006.
• Michal Kozubek, Petr Matula, Pavel Matula, Stanislav Kozubek. Automated acquisition and processing of multidimensional image data in confocal in vivo microscopy. Microscopy research and technique, 64(2), 164-175, 2004.
• Petr Matula, Michal Kozubek, Florian Staier, Michael Hausmann. Precise 3D image alignment in micro-axial tomography. Journal of Microscopy, 209, 126-142, 2003.
• Michal Kozubek, Magdalena Skalníková, Petr Matula, Eva Bártová, Joachim Rauch, Friedrich Neuhaus, Heinz Eipel, Michael Hausmann. Automated micro axial tomography of cell nuclei after specific labelling by fluorescence in situ hybridisation. Micron, 33, 655-665, 2002.
• Michal Kozubek, Stanislav Kozubek, Emilie Lukášová, Eva Bártová, Magdalena Skalníková, Pavel Matula, Petr Matula, Pavla Jirsová, Alena Gaňová, Irena Koutná. Combined confocal and wide-field high-resolution cytometry of FISH-stained cells. Cytometry, 45, 1-12, 2001.
• Michal Kozubek, Petr Matula. An efficient algorithm for measurement and correction of chromatic aberrations in fluorescence microscopy. Journal of Microscopy, 200, 206-217, 2000.

Conference proceedings

• Jan Hubený, Pavel Matula, Petr Matula, Michal Kozubek. Improved 3D Reconstruction of Interphase Chromosomes Based on Nonlinear Diffusion Filtering. In Proceedings of PDE-Based Image Processing and Related Inverse Problems. Berlin : Springer-Verlag, 2006, in press.
• Petr Matula, Michal Kozubek, Pavel Matula. Applications of Image Registration in Human Genome Research. In Computer Vision and Mathematical Methods in Medical and Biomedical Image Analysis. Berlin : Springer-Verlag, 2004, 376-384.
• Michal Kozubek, Petr Matula, Pavel Matula. Automated confocal microscopy: The way of achieving both quality and quantity in 3D image cytometry. In International Symposium on Biomedical Imaging. Arlington, USA : IEEE, 2004, 69-72
• Pavel Matula, Petr Matula, Michal Kozubek, Petr Mejzlík. High-Resolution Cytometry Network Project: Client/Server System for 3D Optical Microscope Data Storage and Analysis. In 2nd International Symposium on 3D Data Processing, Visualization, and Transmission. Los Alamitos : IEEE Computer Society, 2004, 580-583
• Michal Kozubek, Petr Matula, Heinz Eipel, Michael Hausmann. Automated multi-view 3D image acquisition in human genome research. In 3D data processing, visualization and transmission. Los Alamitos : IEEE Computer Society, 2002, 91-98.
• Michal Kozubek, Petr Matula, Pavel Matula, Petr Mejzlík. High-resolution cytometry network project: Towards remote and distributed acquisition, processing and visualisation of 3D image data in human genome research. In 3D data processing, visualization and transmission. Los Alamitos : IEEE Computer Society, 2002, 99-106.

Miscellaneous

• Michal Kozubek, Petr Matula, Pavel Matula. The power of computerized light microscopy. Imaging & Microscopy, Darmstadt : GIT Verlag, 2002, 4, 25-28.

Theses

• Petr Matula. Applications of Image Registrations in Fluorescence Microscopy. Ph.D. Thesis, Masaryk University, Brno, 2003.
• Petr Matula. Rozpoznávání českého textu psaného rukou. Master Thesis, Masaryk University, Brno, 1998.